08-26
Course Introduction
Course SyllabusOffice HoursIntroductory Slides
08-28
Unix, not Eunuchs
09-02
Shell Games
09-04
Shell Games (cont'd)
09-09
Computational Experimentation
09-11
Protein Data Bank
09-16
Protein Folds
09-18
Presentation Graphics
09-23
Presentation Graphics (cont'd)
09-25
Solvent Accessibility
09-30
Hydrogen Bonding
10-02
Secondary Structure
10-07
Midterm Exam
10-09
Sequence Alignment (Global)
10-14
Secondary Structure Prediction
10-16
No Class—Fall Recess
10-21
Tertiary Structure Prediction
10-23
Tertiary Structure Prediction (cont'd)
10-28
Molecular Dynamics
10-30
Docking
11-04
Sequence Alignment (Local)
11-06
Sequence Alignment (Local) (cont'd)
11-11
Phylogeny
11-13
High–Throughput Sequencing
11-18
Alignment to a Reference Sequence
11-20
Variant/SNP Calling
11-25
No Class—Thanksgiving Recess
11-27
No Class—Thanksgiving Recess
12-02
Various and Sundry Tools
12-04
Various and Sundry Tools (cont'd)
12-09
Using the Literature
12-16
Final Exam—18:00
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