Thursday, 20 November, 2025
[kevshaw@451]$ history
1 date
2 ls
3 cd ps7
4 ls
5 cat 6Y3CA.pdbqt
6 cat 6Y3CA.pdbqt | wc -l
7 head -4520 6Y3CA.pdbqt
8 head -4520 6Y3CA.pdbqt > cox1.pdb
9 naccess cox1.pdb
10 cat cox1.rsa
11 ls
12 tail cox1.rsa ; tail 6Y3CA.rsa
13 cat 6Y3CA.pdbqt | wc -l
14 grep LIG 6Y3CA.pdbqt
15 grep LIG 6Y3CA.pdbqt | wc -l
16 ./rscr | sort -n -k 2 | less
17 cd 000577747781
18 ls
19 less out.pdbqt
20 grep ^ATOM out.pdbqt
21 grep ^ATOM out.pdbqt | head -22
22 cd ..
23 less 6Y3CA.pdbqt
24 history
25 cd
26 ls
27 cd p3
28 ls
29 less p
30 less p3.out
31 cd
32 mkdir phyl
33 cd phyl
34 wget https://biochemistry.prof/451/data/cytc.gz
35 gunzip cytc.gz
36 ls
37 gzip cytc
38 ls
39 ls -l
40 gunzip cytc.gz
41 ls -l
42 nano hello
43 ls -l
44 ./hello
45 chmod x hello
46 ls -l
47 ./hello
48 chmod -x hello
49 ls -l
50 python3 hello
51 less cytc
52 clustalw
53 ls
54 ls -l
55 clustalw
56 ls -l
57 less cytc.aln
58 clustalw
59 less cytc.dnd
60 drawtree
61 convert plotfile plot.jpg
62 cd /usr/local/bin/phylip
63 ls
64 cd
[kevshaw@451]$