Tuesday, 18 November, 2025
[kevshaw@451]$ history
1 date
2 cd ps7
3 ls
4 ./rscr
5 ./rscr | sort -n -r | less
6 ./rscr | sort -n -k 2 | less
7 cd 000577747781
8 ls
9 ls -l
10 less out.pdbqt
11 cat out.pdbqt
12 cat out.pdbqt | grep ^ATOM
13 cat out.pdbqt | grep ^ATOM | head -22
14 ls -l ../6Y3CA.pdbqt
15 cat out.pdbqt | grep ^ATOM | head -22 >> ../6Y3CA.pdbqt
16 ls -l ../6Y3CA.pdbqt
17 cd
18 cd ps7
19 less 6Y3CA.pdbqt
20 molauto 6Y3CA.pdbqt | molsort > 6yc3a.ms
21 nano 6yc3a.ms
22 molscript < 6yc3a.ms > 6yc3a.ps
23 ls
24 convert 6yc3a.ps 6yc3a.jpg
25 ./rscr | sort -n -k 2 | less
26 hbplus 6Y3CA.pdbqt
27 less 6Y3CA.hb2
28 grep MH 6Y3CA.hb2
29 grep HM 6Y3CA.hb2
30 grep HS 6Y3CA.hb2
31 grep SH 6Y3CA.hb2
32 egrep MH|HM|SH|HS 6Y3CA.pdbqt
33 egrep 'MH|HM|SH|HS' 6Y3CA.pdbqt
34 egrep 'MH|HM|SH|HS' 6Y3CA.hb2
35 history
36 naccess 6Y3CA.pdbqt
37 less 6Y3CA.rsa
38 nano 6Y3CA.pdbqt
39 naccess 6Y3CA.pdbqt
40 cat 6Y3CA.rsa
41 24642.8
42 bc
43 less 6Y3CA.pdbqt
44 history
45 cd 000577747781
46 cat out.pdbqt | grep ^ATOM | head -22 >> ../6Y3CA.pdbqt
47 cd ..
48 cat 6Y3CA.pdbqt
49 cat 6Y3CA.pdbqt | wc -l
50 cat 6Y3CA.pdbqt | head -4520
51 cat 6Y3CA.pdbqt | head -4520 > cox-1.pdb
52 ls
53 naccess 6Y3CA.pdbqt
54 naccess cox-1.pdb
55 tail -10 cox-1.rsa ; tail -10 6Y3CA.rsa
56 tail -10 cox-1.rsa
57 tail -10 6Y3CA.rsa
58 cd
59 mkdir p3
60 cd p3
61 wget https://biochemistry.prof/451/data/pbr322.p3
62 less pbr322.p3
63 primer3 pbr322.p3
64 primer3 pbr322.p3 | less
65 nano p
66 cat p
67 blastn -db nt -query p -word_size 5 | less
68 cd
[kevshaw@451]$