Tuesday, 9 December, 2025
[kevshaw@451]$ history
1 date
2 cd seq/
3 ls
4 less snps.vcf
5 less SRR507778_2.fastq
6 cd
7 ls
8 mkdir ps9
9 cd ps9
10 wget https://biochemistry.prof/451/data/myog-sea.gz
11 gzip -dv myog-sea.gz
12 cat myog-sea
13 clustalw
14 ls
15 cat myog-sea
16 cat myog-sea.dnd
17 drawtree
18 convert plotfile plotfile.jpg
19 ls
20 wget https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR403105/SRR403105
21 fastq-dump --split-spot SRR403105
22 nano call
23 chmod x call
24 date
25 date %s
26 nano call
27 cd ../seq
28 ls
29 ../ps9/call yeast.fa SRR507778_1.fastq SRR507778_2.fastq
30 ls
31 rm 1765298659.sam
32 ../ps9/call yeast.fa 1.fastq 2.fastq
33 ls -al
34 gzip -d 1765298696.vcf.gz
35 ls -al
36 diff 1765298696.vcf snps.vcf
37 cd ../ps9
38 ls
39 molscript -h
40 gfp -h
41 nano call
42 ./call --help
43 ls
44 ./call ../seq/yeast.fa SRR403105.fastq
45 cd
[kevshaw@451]$