Thursday, 23 September, 2021
[kevshaw@451]$ history
1 ls
2 gfp -f 1poh
3 ls
4 naccess 1POH.pdb
5 ls 1*
6 less 1POH.log
7 less 1POH.asa
8 less 1POH.rsa
9 cd pdbselect/
10 cd ..
11 mkdir pdbselect-chains
12 cd pdbselect-chains/
13 cp ../pdbselect/2017-11-18.pdbsel .
14 ls
15 history
16 ls
17 c
18 cd
19 find 2017-11-18.pdbsel . -print
20 find 2017-11-18.pdbsel .
21 find 2017-11-18.pdbsel
22 find ./ 2017-11-18.pdbsel
23 cd pdbselect-chains/
24 rm 2017-11-18.pdbsel
25 wget https://homepages.thm.de/~hg12640/2017-11-18.pdbsel
26 cat 2017-11-18.pdbsel
27 grep '^ ' 2017-11-18.pdbsel | less
28 grep '^ ' 2017-11-18.pdbsel | cut -c9-13 | less
29 man gfp
30 grep '^ ' 2017-11-18.pdbsel | cut -c9-13 | head -10 | gfp -fc
31 ls
32 less 5D8VA.pdb
33 ls -l
34 ls -l ../pdbselect
35 less 5D8VA.pdb
36 ls
37 run-naccess
38 ls
39 rm *.asa *.rsa *.log
40 ls
41 cd ..
42 rm -r pdbselect-chains/
43 mkdir pdbselect-chains
44 cd pdbselect-chains/
45 cp ../pdbselect/2017-11-18.pdbsel .
46 grep '^ ' 2017-11-18.pdbsel | cut -c9-13 | head -10 | gfp -fc
47 ls
48 run-naccess
49 ls
50 accres res=SER *.rsa
51 cd
52 rm -r pdbselect-chains/
53 gfp -f 7rsa
54 ls 7*
55 molauto 7RSA.pdb | molsort > 7rsa.ms
56 nano 7rsa.ms
57 molscript < 7rsa.ms > 7rsa.ps
58 convert 7rsa.ps 7rsa.jpg
59 history
60 less 7RSA.pdb
61 nano 7rsa.ms
62 molscript < 7rsa.ms > 7rsa.ps
63 convert 7rsa.ps 7rsa.jpg
64 history
65 cat 7rsa.ms
66 cd
[kevshaw@451]$